Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LCMT2O60294 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 AP005117.1-202ENST00000581724 1908 ntBASIC15.32■□□□□ 0.04
LCMT2O60294 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.32■□□□□ 0.04
LCMT2O60294 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LCMT2O60294 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LCMT2O60294 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.32■□□□□ 0.04
LCMT2O60294 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LCMT2O60294 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
LCMT2O60294 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.32■□□□□ 0.04
LCMT2O60294 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LCMT2O60294 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCMT2O60294 AC022188.1-201ENST00000620960 1664 ntBASIC15.32■□□□□ 0.04
LCMT2O60294 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
LCMT2O60294 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LCMT2O60294 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 AL080243.2-201ENST00000418783 582 ntBASIC15.31■□□□□ 0.04
LCMT2O60294 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 EEF1DP4-201ENST00000446006 880 ntBASIC15.31■□□□□ 0.04
LCMT2O60294 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.31■□□□□ 0.04
LCMT2O60294 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.31■□□□□ 0.04
LCMT2O60294 AC027796.2-201ENST00000575326 344 ntBASIC15.31■□□□□ 0.04
LCMT2O60294 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.31■□□□□ 0.04
LCMT2O60294 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.31■□□□□ 0.04
LCMT2O60294 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.31■□□□□ 0.04
LCMT2O60294 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.31■□□□□ 0.04
LCMT2O60294 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 AC073592.8-201ENST00000624126 511 ntBASIC15.31■□□□□ 0.04
LCMT2O60294 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LCMT2O60294 AL596257.1-201ENST00000641463 2694 ntBASIC15.31■□□□□ 0.04
LCMT2O60294 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.31■□□□□ 0.04
LCMT2O60294 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.31■□□□□ 0.04
LCMT2O60294 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
LCMT2O60294 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCMT2O60294 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.3■□□□□ 0.04
LCMT2O60294 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.3■□□□□ 0.04
LCMT2O60294 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LCMT2O60294 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LCMT2O60294 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.3■□□□□ 0.04
LCMT2O60294 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.3■□□□□ 0.04
LCMT2O60294 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 AZGP1P1-201ENST00000411909 902 ntBASIC15.3■□□□□ 0.04
LCMT2O60294 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.3■□□□□ 0.04
LCMT2O60294 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.3■□□□□ 0.04
LCMT2O60294 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 PHKG1P2-201ENST00000457537 863 ntBASIC15.3■□□□□ 0.04
LCMT2O60294 HLA-V-204ENST00000476601 1289 ntBASIC15.3■□□□□ 0.04
LCMT2O60294 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.3■□□□□ 0.04
LCMT2O60294 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
LCMT2O60294 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.3■□□□□ 0.04
LCMT2O60294 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.3■□□□□ 0.04
LCMT2O60294 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.3■□□□□ 0.04
LCMT2O60294 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LCMT2O60294 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.3■□□□□ 0.04
LCMT2O60294 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.3■□□□□ 0.04
LCMT2O60294 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.3■□□□□ 0.04
LCMT2O60294 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCMT2O60294 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms