Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PDE6DO43924 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
PDE6DO43924 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 AL353732.1-201ENST00000569618 1459 ntBASIC12.47□□□□□ -0.41
PDE6DO43924 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 ARMC10P1-201ENST00000313754 855 ntBASIC12.47□□□□□ -0.41
PDE6DO43924 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PDE6DO43924 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.47□□□□□ -0.41
PDE6DO43924 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.47□□□□□ -0.41
PDE6DO43924 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.47□□□□□ -0.41
PDE6DO43924 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.47□□□□□ -0.41
PDE6DO43924 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.47□□□□□ -0.41
PDE6DO43924 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PDE6DO43924 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.47□□□□□ -0.41
PDE6DO43924 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDE6DO43924 TP73-AS1-210ENST00000637775 1455 ntBASIC12.46□□□□□ -0.41
PDE6DO43924 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.46□□□□□ -0.41
PDE6DO43924 AC092127.1-201ENST00000567093 3455 ntBASIC12.46□□□□□ -0.41
PDE6DO43924 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
PDE6DO43924 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.46□□□□□ -0.41
PDE6DO43924 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
PDE6DO43924 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.46□□□□□ -0.41
PDE6DO43924 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 PRORSD1P-201ENST00000295112 541 ntBASIC12.46□□□□□ -0.41
PDE6DO43924 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
PDE6DO43924 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.46□□□□□ -0.41
PDE6DO43924 TSPY22P-201ENST00000427496 604 ntBASIC12.46□□□□□ -0.41
PDE6DO43924 LIN28AP1-201ENST00000429574 405 ntBASIC12.46□□□□□ -0.41
PDE6DO43924 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.46□□□□□ -0.41
PDE6DO43924 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.46□□□□□ -0.41
PDE6DO43924 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.46□□□□□ -0.41
PDE6DO43924 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.46□□□□□ -0.41
PDE6DO43924 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 REXO1L3P-201ENST00000622202 1288 ntBASIC12.46□□□□□ -0.41
PDE6DO43924 AC011558.1-201ENST00000623459 338 ntBASIC12.46□□□□□ -0.41
PDE6DO43924 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.46□□□□□ -0.41
PDE6DO43924 AP000867.4-201ENST00000641616 219 ntBASIC12.46□□□□□ -0.41
PDE6DO43924 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.46□□□□□ -0.41
PDE6DO43924 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDE6DO43924 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.46□□□□□ -0.41
PDE6DO43924 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PDE6DO43924 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PDE6DO43924 BEND3P1-201ENST00000421591 1944 ntBASIC12.46□□□□□ -0.42
PDE6DO43924 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PDE6DO43924 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.46□□□□□ -0.42
PDE6DO43924 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PDE6DO43924 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.46□□□□□ -0.42
PDE6DO43924 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PDE6DO43924 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PDE6DO43924 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PDE6DO43924 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PDE6DO43924 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.46□□□□□ -0.42
PDE6DO43924 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms