Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
ITM2AO43736 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.74■□□□□ 0.11
ITM2AO43736 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.74■□□□□ 0.11
ITM2AO43736 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ITM2AO43736 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.74■□□□□ 0.11
ITM2AO43736 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.74■□□□□ 0.11
ITM2AO43736 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ITM2AO43736 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.74■□□□□ 0.11
ITM2AO43736 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ITM2AO43736 PRSS29P-201ENST00000440800 595 ntBASIC15.74■□□□□ 0.11
ITM2AO43736 FAM197Y8-203ENST00000450145 560 ntBASIC15.74■□□□□ 0.11
ITM2AO43736 UNC93B7-201ENST00000509439 705 ntBASIC15.74■□□□□ 0.11
ITM2AO43736 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.74■□□□□ 0.11
ITM2AO43736 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.74■□□□□ 0.11
ITM2AO43736 AC002347.1-201ENST00000569543 541 ntBASIC15.74■□□□□ 0.11
ITM2AO43736 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.74■□□□□ 0.11
ITM2AO43736 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ITM2AO43736 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ITM2AO43736 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.74■□□□□ 0.11
ITM2AO43736 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ITM2AO43736 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.73■□□□□ 0.11
ITM2AO43736 LINC00528-201ENST00000600723 2160 ntBASIC15.73■□□□□ 0.11
ITM2AO43736 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.73■□□□□ 0.11
ITM2AO43736 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.73■□□□□ 0.11
ITM2AO43736 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
ITM2AO43736 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ITM2AO43736 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.73■□□□□ 0.11
ITM2AO43736 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.73■□□□□ 0.11
ITM2AO43736 AC092474.2-201ENST00000424288 719 ntBASIC15.73■□□□□ 0.11
ITM2AO43736 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.73■□□□□ 0.11
ITM2AO43736 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.73■□□□□ 0.11
ITM2AO43736 AC109635.5-201ENST00000533593 962 ntBASIC15.73■□□□□ 0.11
ITM2AO43736 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.73■□□□□ 0.11
ITM2AO43736 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.73■□□□□ 0.11
ITM2AO43736 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ITM2AO43736 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.73■□□□□ 0.11
ITM2AO43736 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ITM2AO43736 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ITM2AO43736 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ITM2AO43736 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.73■□□□□ 0.11
ITM2AO43736 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.73■□□□□ 0.11
ITM2AO43736 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
ITM2AO43736 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ITM2AO43736 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ITM2AO43736 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.72■□□□□ 0.11
ITM2AO43736 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ITM2AO43736 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ITM2AO43736 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ITM2AO43736 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.72■□□□□ 0.11
ITM2AO43736 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ITM2AO43736 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.72■□□□□ 0.11
ITM2AO43736 AC108751.1-201ENST00000490852 363 ntBASIC15.72■□□□□ 0.11
ITM2AO43736 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.72■□□□□ 0.11
ITM2AO43736 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.72■□□□□ 0.11
ITM2AO43736 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.72■□□□□ 0.11
ITM2AO43736 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.72■□□□□ 0.11
ITM2AO43736 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ITM2AO43736 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ITM2AO43736 KRT8P44-201ENST00000441609 1350 ntBASIC15.72■□□□□ 0.11
ITM2AO43736 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ITM2AO43736 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ITM2AO43736 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms