Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 RPS2P4-201ENST00000476944 856 ntBASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC073195.1-201ENST00000607241 877 ntBASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AL031985.4-201ENST00000642138 673 ntBASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC004951.3-201ENST00000418645 1148 ntBASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 KRT18P23-201ENST00000435622 1283 ntBASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AF186192.3-201ENST00000583427 947 ntBASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CR392000.1-201ENST00000624770 1228 ntBASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AC092117.1-201ENST00000621230 3250 ntBASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC14.01□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 AP001972.5-201ENST00000624624 2338 ntBASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BOLA2-SMG1P6H3BVE0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms