Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPA3F8WFD2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 AL080243.2-201ENST00000418783 582 ntBASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 RN7SL618P-201ENST00000477850 296 ntBASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 AP005018.1-201ENST00000525475 301 ntBASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 AC061975.2-201ENST00000581722 295 ntBASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 AL662799.1-202ENST00000614205 422 ntBASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA3F8WFD2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 PCDH8P1-201ENST00000428983 2773 ntBASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 SPTLC1P1-201ENST00000447199 261 ntBASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 AC135586.1-201ENST00000539323 574 ntBASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPA3F8WFD2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 CYP2T1P-202ENST00000641596 2535 ntBASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NPIPA3F8WFD2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms