Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CFAP99D6REC4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP99D6REC4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 SPDYE7P-202ENST00000420373 878 ntBASIC16.06■□□□□ 0.16
CFAP99D6REC4 AL353705.2-201ENST00000428243 662 ntBASIC16.06■□□□□ 0.16
CFAP99D6REC4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 AC026979.3-201ENST00000607315 403 ntBASIC16.06■□□□□ 0.16
CFAP99D6REC4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP99D6REC4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CFAP99D6REC4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 HAUS4P1-201ENST00000406739 1145 ntBASIC16.05■□□□□ 0.16
CFAP99D6REC4 TSEN15P1-201ENST00000423257 515 ntBASIC16.05■□□□□ 0.16
CFAP99D6REC4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 AC061975.2-201ENST00000581722 295 ntBASIC16.05■□□□□ 0.16
CFAP99D6REC4 AC027612.4-201ENST00000605371 583 ntBASIC16.05■□□□□ 0.16
CFAP99D6REC4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.05■□□□□ 0.16
CFAP99D6REC4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CFAP99D6REC4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.04■□□□□ 0.16
CFAP99D6REC4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CFAP99D6REC4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CFAP99D6REC4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CFAP99D6REC4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CFAP99D6REC4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CFAP99D6REC4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CFAP99D6REC4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CFAP99D6REC4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CFAP99D6REC4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms