Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.28□□□□□ -0.44
COLCA2A8K830 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.28□□□□□ -0.44
COLCA2A8K830 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
COLCA2A8K830 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
COLCA2A8K830 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.28□□□□□ -0.44
COLCA2A8K830 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
COLCA2A8K830 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.28□□□□□ -0.44
COLCA2A8K830 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
COLCA2A8K830 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
COLCA2A8K830 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
COLCA2A8K830 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
COLCA2A8K830 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.27□□□□□ -0.44
COLCA2A8K830 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.27□□□□□ -0.44
COLCA2A8K830 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
COLCA2A8K830 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
COLCA2A8K830 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
COLCA2A8K830 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.27□□□□□ -0.44
COLCA2A8K830 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
COLCA2A8K830 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.27□□□□□ -0.44
COLCA2A8K830 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
COLCA2A8K830 BNIP3P1-202ENST00000550043 1585 ntBASIC12.27□□□□□ -0.44
COLCA2A8K830 AC009336.1-201ENST00000608941 1553 ntBASIC12.27□□□□□ -0.44
COLCA2A8K830 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.27□□□□□ -0.44
COLCA2A8K830 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.27□□□□□ -0.44
COLCA2A8K830 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.27□□□□□ -0.45
COLCA2A8K830 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 TSPY12P-201ENST00000421279 868 ntBASIC12.27□□□□□ -0.45
COLCA2A8K830 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.27□□□□□ -0.45
COLCA2A8K830 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.27□□□□□ -0.45
COLCA2A8K830 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 SEC1P-202ENST00000473944 940 ntBASIC12.27□□□□□ -0.45
COLCA2A8K830 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.27□□□□□ -0.45
COLCA2A8K830 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.27□□□□□ -0.45
COLCA2A8K830 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.27□□□□□ -0.45
COLCA2A8K830 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.27□□□□□ -0.45
COLCA2A8K830 MIR6786-201ENST00000616843 113 ntBASIC12.27□□□□□ -0.45
COLCA2A8K830 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.27□□□□□ -0.45
COLCA2A8K830 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.27□□□□□ -0.45
COLCA2A8K830 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
COLCA2A8K830 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.27□□□□□ -0.45
COLCA2A8K830 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.27□□□□□ -0.45
COLCA2A8K830 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
COLCA2A8K830 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
COLCA2A8K830 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COLCA2A8K830 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.26□□□□□ -0.45
COLCA2A8K830 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.26□□□□□ -0.45
COLCA2A8K830 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COLCA2A8K830 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COLCA2A8K830 TRIM80P-201ENST00000455685 2848 ntBASIC12.26□□□□□ -0.45
COLCA2A8K830 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
COLCA2A8K830 AC005622.1-201ENST00000636801 1703 ntBASIC12.26□□□□□ -0.45
COLCA2A8K830 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COLCA2A8K830 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.26□□□□□ -0.45
COLCA2A8K830 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.26□□□□□ -0.45
COLCA2A8K830 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
COLCA2A8K830 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
COLCA2A8K830 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.26□□□□□ -0.45
COLCA2A8K830 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
COLCA2A8K830 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
COLCA2A8K830 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
COLCA2A8K830 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
COLCA2A8K830 AC004945.1-201ENST00000416738 983 ntBASIC12.26□□□□□ -0.45
COLCA2A8K830 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.26□□□□□ -0.45
COLCA2A8K830 TMEM198B-204ENST00000484016 896 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms