Protein–RNA interactions for Protein: A5YM72

CARNS1, Carnosine synthase 1, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARNS1A5YM72 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CARNS1A5YM72 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CARNS1A5YM72 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.79■□□□□ 0.28
CARNS1A5YM72 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CARNS1A5YM72 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
CARNS1A5YM72 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.79■□□□□ 0.28
CARNS1A5YM72 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CARNS1A5YM72 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CARNS1A5YM72 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.79■□□□□ 0.28
CARNS1A5YM72 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CARNS1A5YM72 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 FAM86MP-201ENST00000340703 885 ntBASIC16.78■□□□□ 0.28
CARNS1A5YM72 BRWD1P1-201ENST00000401091 371 ntBASIC16.78■□□□□ 0.28
CARNS1A5YM72 AC099336.1-201ENST00000417053 1171 ntBASIC16.78■□□□□ 0.28
CARNS1A5YM72 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 AC023310.1-201ENST00000554836 735 ntBASIC16.78■□□□□ 0.28
CARNS1A5YM72 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 DUX4L45-201ENST00000566406 1057 ntBASIC16.78■□□□□ 0.28
CARNS1A5YM72 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 AC005252.2-201ENST00000624630 1141 ntBASIC16.78■□□□□ 0.28
CARNS1A5YM72 REXO1L6P-201ENST00000603433 1515 ntBASIC16.78■□□□□ 0.28
CARNS1A5YM72 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CARNS1A5YM72 DRD5P1-201ENST00000456605 1438 ntBASIC16.78■□□□□ 0.28
CARNS1A5YM72 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CARNS1A5YM72 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 AC006449.6-201ENST00000612330 2296 ntBASIC16.77■□□□□ 0.28
CARNS1A5YM72 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 AL607033.1-201ENST00000623900 1599 ntBASIC16.77■□□□□ 0.28
CARNS1A5YM72 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 AC009053.2-201ENST00000563701 2365 ntBASIC16.77■□□□□ 0.28
CARNS1A5YM72 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CARNS1A5YM72 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 RN7SL219P-201ENST00000582872 296 ntBASIC16.77■□□□□ 0.28
CARNS1A5YM72 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CARNS1A5YM72 AC008687.7-202ENST00000637404 953 ntBASIC16.77■□□□□ 0.28
CARNS1A5YM72 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CARNS1A5YM72 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CARNS1A5YM72 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.77■□□□□ 0.27
CARNS1A5YM72 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CARNS1A5YM72 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CARNS1A5YM72 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.77■□□□□ 0.27
CARNS1A5YM72 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CARNS1A5YM72 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CARNS1A5YM72 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CARNS1A5YM72 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CARNS1A5YM72 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms