Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 AC148477.4-201ENST00000613430 1793 ntBASIC13.99□□□□□ -0.17
SHISA3A0PJX4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 WASH6P-202ENST00000359512 1437 ntBASIC13.98□□□□□ -0.17
SHISA3A0PJX4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 IER3-202ENST00000376377 1350 ntBASIC13.98□□□□□ -0.17
SHISA3A0PJX4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 KRT18P27-201ENST00000427733 1299 ntBASIC13.98□□□□□ -0.17
SHISA3A0PJX4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 MIR4313-201ENST00000580760 101 ntBASIC13.98□□□□□ -0.17
SHISA3A0PJX4 AL365330.1-201ENST00000607459 531 ntBASIC13.98□□□□□ -0.17
SHISA3A0PJX4 AC092119.3-201ENST00000612618 583 ntBASIC13.98□□□□□ -0.17
SHISA3A0PJX4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHISA3A0PJX4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 CICP14-201ENST00000629111 2732 ntBASIC13.97□□□□□ -0.17
SHISA3A0PJX4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 GPX1P2-201ENST00000429271 606 ntBASIC13.97□□□□□ -0.17
SHISA3A0PJX4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 MIR3909-201ENST00000579518 119 ntBASIC13.97□□□□□ -0.17
SHISA3A0PJX4 MIR4321-201ENST00000592276 80 ntBASIC13.97□□□□□ -0.17
SHISA3A0PJX4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SHISA3A0PJX4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 401.6 ms