Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 AL591424.1-201ENST00000442569 1213 ntBASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 AC074386.1-202ENST00000463561 864 ntBASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 KRT18P34-201ENST00000488218 1270 ntBASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 PDPK2P-202ENST00000562415 1191 ntBASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 AC092865.6-201ENST00000642101 219 ntBASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RHBDD3Q9Y3P4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AC023824.1-201ENST00000562945 2975 ntBASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AC068137.2-201ENST00000605408 478 ntBASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AL078644.1-201ENST00000609881 752 ntBASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 FAM197Y3-203ENST00000618346 717 ntBASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 U82695.1-201ENST00000635752 1889 ntBASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
RHBDD3Q9Y3P4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms