Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC087499.5-201ENST00000452760 1342 ntBASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 AC136604.1-201ENST00000418535 575 ntBASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 AC010336.2-201ENST00000564226 506 ntBASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHA4Q9UN74 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 TSSK5P-201ENST00000423978 907 ntBASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 AC241585.1-201ENST00000433527 519 ntBASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 RN7SL618P-201ENST00000477850 296 ntBASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 AC005498.2-205ENST00000593218 784 ntBASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 AL844908.2-201ENST00000609461 460 ntBASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDHA4Q9UN74 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA4Q9UN74 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms