Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 AC007191.1-201ENST00000623179 2995 ntBASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT11Q9UKZ1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CNOT11Q9UKZ1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CNOT11Q9UKZ1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.46■□□□□ 0.06
CNOT11Q9UKZ1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.46■□□□□ 0.06
CNOT11Q9UKZ1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CNOT11Q9UKZ1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CNOT11Q9UKZ1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
CNOT11Q9UKZ1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 ALG1L5P-201ENST00000482043 771 ntBASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 AL031432.2-201ENST00000566714 459 ntBASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 AL928711.1-201ENST00000570165 459 ntBASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 AC068137.2-201ENST00000605408 478 ntBASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 GPALPP1-207ENST00000611650 899 ntBASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 LINC00528-201ENST00000600723 2160 ntBASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 CICP23-201ENST00000605013 2741 ntBASIC15.45■□□□□ 0.06
CNOT11Q9UKZ1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 SLC22A20-204ENST00000530038 1673 ntBASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 HMGA1P7-201ENST00000406908 502 ntBASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 MPDU1-223ENST00000582151 728 ntBASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 AL078644.1-201ENST00000609881 752 ntBASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 AC055717.3-201ENST00000622967 595 ntBASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT11Q9UKZ1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms