Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CLIP2Q9UDT6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 AC022144.1-201ENST00000602255 1580 ntBASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 AC008761.3-201ENST00000624803 892 ntBASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIP2Q9UDT6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CLIP2Q9UDT6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CLIP2Q9UDT6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.02■□□□□ 0.63
CLIP2Q9UDT6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLIP2Q9UDT6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLIP2Q9UDT6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CLIP2Q9UDT6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.02■□□□□ 0.63
CLIP2Q9UDT6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 AC087499.5-201ENST00000452760 1342 ntBASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 COX20P2-201ENST00000452636 358 ntBASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.01■□□□□ 0.63
CLIP2Q9UDT6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 AC068418.2-201ENST00000577309 3703 ntBASIC19■□□□□ 0.63
CLIP2Q9UDT6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms