Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 AL136982.4-201ENST00000437689 1740 ntBASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 AL353705.2-201ENST00000428243 662 ntBASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CUEDC1Q9NWM3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 CDC14C-201ENST00000428251 1719 ntBASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 AC069224.1-201ENST00000566372 1715 ntBASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 SPDYE7P-202ENST00000420373 878 ntBASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 LINC02447-202ENST00000501888 2146 ntBASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 AC134407.2-201ENST00000625089 1978 ntBASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CUEDC1Q9NWM3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CUEDC1Q9NWM3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms