Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 RN7SL510P-201ENST00000581311 263 ntBASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 AL136982.4-201ENST00000437689 1740 ntBASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC52A3Q9NQ40 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AC004987.2-201ENST00000395959 1148 ntBASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 RPS8P6-201ENST00000426177 609 ntBASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 KRT18P2-201ENST00000447938 1258 ntBASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AC079776.4-201ENST00000511039 504 ntBASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AP002472.1-201ENST00000577490 586 ntBASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 SPTSSB-204ENST00000617024 1292 ntBASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AL161645.1-201ENST00000622716 1255 ntBASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 AC023024.2-201ENST00000623561 1993 ntBASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC52A3Q9NQ40 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 MRPL3P1-201ENST00000400109 1033 ntBASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 EEF1DP4-201ENST00000446006 880 ntBASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 AC099522.2-201ENST00000607001 744 ntBASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC52A3Q9NQ40 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms