Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 AC023274.1-201ENST00000418278 595 ntBASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 AC243562.2-201ENST00000561247 970 ntBASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 AC068587.6-202ENST00000641839 5619 ntBASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NEUROD4Q9HD90 KRT18P28-201ENST00000453838 1332 ntBASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AC067930.6-201ENST00000623257 4947 ntBASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 TFAMP1-201ENST00000412727 736 ntBASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AL671277.1-201ENST00000429656 993 ntBASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 FAM58CP-201ENST00000435741 640 ntBASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 SNHG9-202ENST00000564014 471 ntBASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AC061975.2-201ENST00000581722 295 ntBASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NEUROD4Q9HD90 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 NORAD-201ENST00000565493 5339 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms