Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 C2orf69P2-201ENST00000562032 1123 ntBASIC17.4■□□□□ 0.38
HIPK3Q9H422 DUX4L45-201ENST00000566406 1057 ntBASIC17.4■□□□□ 0.38
HIPK3Q9H422 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK3Q9H422 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK3Q9H422 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK3Q9H422 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK3Q9H422 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK3Q9H422 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.4■□□□□ 0.38
HIPK3Q9H422 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HIPK3Q9H422 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.39■□□□□ 0.38
HIPK3Q9H422 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HIPK3Q9H422 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 C2orf27AP3-201ENST00000434123 579 ntBASIC17.39■□□□□ 0.37
HIPK3Q9H422 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 KRT8P13-201ENST00000463294 1010 ntBASIC17.39■□□□□ 0.37
HIPK3Q9H422 POU5F1P6-201ENST00000466990 990 ntBASIC17.39■□□□□ 0.37
HIPK3Q9H422 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 AL354718.3-201ENST00000616414 581 ntBASIC17.39■□□□□ 0.37
HIPK3Q9H422 CR382287.1-201ENST00000623954 586 ntBASIC17.39■□□□□ 0.37
HIPK3Q9H422 AC008687.7-202ENST00000637404 953 ntBASIC17.39■□□□□ 0.37
HIPK3Q9H422 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK3Q9H422 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.39■□□□□ 0.37
HIPK3Q9H422 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 AL592424.1-201ENST00000563624 1536 ntBASIC17.38■□□□□ 0.37
HIPK3Q9H422 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 AC006033.1-201ENST00000440505 426 ntBASIC17.38■□□□□ 0.37
HIPK3Q9H422 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 AL118558.3-201ENST00000607414 1079 ntBASIC17.38■□□□□ 0.37
HIPK3Q9H422 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HIPK3Q9H422 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK3Q9H422 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK3Q9H422 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HIPK3Q9H422 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.37■□□□□ 0.37
HIPK3Q9H422 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms