Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NDUFAF3Q9BU61 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 RPS2P28-201ENST00000314255 741 ntBASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AC003669.1-201ENST00000334569 611 ntBASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AL022342.1-201ENST00000400363 863 ntBASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AP001005.1-201ENST00000571755 1248 ntBASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 STK25P1-201ENST00000585406 838 ntBASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 SLC25A6P4-201ENST00000586535 553 ntBASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AL353593.2-201ENST00000602529 1483 ntBASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.51□□□□□ -0.41
NDUFAF3Q9BU61 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFAF3Q9BU61 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms