Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
VGLL1Q99990 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.23□□□□□ -0.45
VGLL1Q99990 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
VGLL1Q99990 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
VGLL1Q99990 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
VGLL1Q99990 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
VGLL1Q99990 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
VGLL1Q99990 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.23□□□□□ -0.45
VGLL1Q99990 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.23□□□□□ -0.45
VGLL1Q99990 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.23□□□□□ -0.45
VGLL1Q99990 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.23□□□□□ -0.45
VGLL1Q99990 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.23□□□□□ -0.45
VGLL1Q99990 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
VGLL1Q99990 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
VGLL1Q99990 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 PMS2P4-201ENST00000412466 1052 ntBASIC12.22□□□□□ -0.45
VGLL1Q99990 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.22□□□□□ -0.45
VGLL1Q99990 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 AL513480.1-201ENST00000451731 511 ntBASIC12.22□□□□□ -0.45
VGLL1Q99990 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 CXCL1P1-201ENST00000502804 216 ntBASIC12.22□□□□□ -0.45
VGLL1Q99990 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.22□□□□□ -0.45
VGLL1Q99990 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.22□□□□□ -0.45
VGLL1Q99990 TNRC18P2-201ENST00000417666 2714 ntBASIC12.22□□□□□ -0.45
VGLL1Q99990 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.22□□□□□ -0.45
VGLL1Q99990 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VGLL1Q99990 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.21□□□□□ -0.45
VGLL1Q99990 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
VGLL1Q99990 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VGLL1Q99990 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms