Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AC211486.1-202ENST00000416371 468 ntBASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AC254562.1-201ENST00000417586 456 ntBASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 RBPMS2P1-201ENST00000437762 623 ntBASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 SPDYE14P-201ENST00000442619 822 ntBASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AC211476.1-201ENST00000503899 468 ntBASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AC026150.2-201ENST00000564693 1156 ntBASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PDLIM5Q96HC4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 HYMAI-201ENST00000635591 3347 ntBASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 AC136604.1-201ENST00000418535 575 ntBASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 AP006288.1-201ENST00000446065 395 ntBASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 AL512356.2-201ENST00000546955 174 ntBASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 AL133215.2-201ENST00000609242 977 ntBASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 AP001059.3-201ENST00000619053 235 ntBASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 PPT1-215ENST00000641471 2368 ntBASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.62■□□□□ 0.09
PDLIM5Q96HC4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 AC087481.3-201ENST00000602886 1894 ntBASIC15.61■□□□□ 0.09
PDLIM5Q96HC4 AP003680.1-201ENST00000598970 3660 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms