Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 SPTLC1P1-201ENST00000447199 261 ntBASIC14.87□□□□□ -0.03
SCMH1Q96GD3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 ZNF890P-202ENST00000530367 1156 ntBASIC14.87□□□□□ -0.03
SCMH1Q96GD3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 AC005225.4-201ENST00000557330 545 ntBASIC14.87□□□□□ -0.03
SCMH1Q96GD3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.87□□□□□ -0.03
SCMH1Q96GD3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 AC144831.1-201ENST00000573312 2656 ntBASIC14.86□□□□□ -0.03
SCMH1Q96GD3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.86□□□□□ -0.03
SCMH1Q96GD3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 AC026979.3-201ENST00000607315 403 ntBASIC14.86□□□□□ -0.03
SCMH1Q96GD3 AC012645.4-201ENST00000610691 1061 ntBASIC14.86□□□□□ -0.03
SCMH1Q96GD3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 AC092364.2-201ENST00000596710 2692 ntBASIC14.86□□□□□ -0.03
SCMH1Q96GD3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SCMH1Q96GD3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCMH1Q96GD3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCMH1Q96GD3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCMH1Q96GD3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SCMH1Q96GD3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.85□□□□□ -0.03
SCMH1Q96GD3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SCMH1Q96GD3 PCGF3-213ENST00000620529 1899 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms