Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC4Q92889 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC4Q92889 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC4Q92889 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC4Q92889 FAAHP1-202ENST00000446499 1238 ntBASIC18.25■□□□□ 0.51
ERCC4Q92889 AC009078.2-202ENST00000463353 338 ntBASIC18.25■□□□□ 0.51
ERCC4Q92889 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC4Q92889 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.25■□□□□ 0.51
ERCC4Q92889 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC4Q92889 MIR3909-201ENST00000579518 119 ntBASIC18.25■□□□□ 0.51
ERCC4Q92889 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.25■□□□□ 0.51
ERCC4Q92889 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC4Q92889 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 AC009090.5-201ENST00000624886 2285 ntBASIC18.25■□□□□ 0.51
ERCC4Q92889 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC4Q92889 AC073439.1-201ENST00000624121 1774 ntBASIC18.25■□□□□ 0.51
ERCC4Q92889 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ERCC4Q92889 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ERCC4Q92889 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.24■□□□□ 0.51
ERCC4Q92889 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 RHOQP3-201ENST00000437982 621 ntBASIC18.24■□□□□ 0.51
ERCC4Q92889 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
ERCC4Q92889 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.24■□□□□ 0.51
ERCC4Q92889 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.24■□□□□ 0.51
ERCC4Q92889 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 SLC25A6P4-201ENST00000586535 553 ntBASIC18.24■□□□□ 0.51
ERCC4Q92889 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.24■□□□□ 0.51
ERCC4Q92889 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.24■□□□□ 0.51
ERCC4Q92889 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.24■□□□□ 0.51
ERCC4Q92889 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.24■□□□□ 0.51
ERCC4Q92889 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 AC134407.2-201ENST00000625089 1978 ntBASIC18.24■□□□□ 0.51
ERCC4Q92889 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC4Q92889 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ERCC4Q92889 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
ERCC4Q92889 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.23■□□□□ 0.51
ERCC4Q92889 KRT18P2-201ENST00000447938 1258 ntBASIC18.23■□□□□ 0.51
ERCC4Q92889 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.23■□□□□ 0.51
ERCC4Q92889 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.23■□□□□ 0.51
ERCC4Q92889 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.23■□□□□ 0.51
ERCC4Q92889 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.23■□□□□ 0.51
ERCC4Q92889 AC096734.2-201ENST00000562054 433 ntBASIC18.23■□□□□ 0.51
ERCC4Q92889 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.23■□□□□ 0.51
ERCC4Q92889 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 AC025580.3-201ENST00000617932 1424 ntBASIC18.23■□□□□ 0.51
ERCC4Q92889 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC4Q92889 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.23■□□□□ 0.51
ERCC4Q92889 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC4Q92889 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC4Q92889 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC4Q92889 AL136379.1-201ENST00000623471 2642 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms