Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.33■□□□□ 0.2
PTCD2Q8WV60 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCD2Q8WV60 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.33■□□□□ 0.2
PTCD2Q8WV60 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.33■□□□□ 0.2
PTCD2Q8WV60 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 MIR346-201ENST00000362234 95 ntBASIC16.32■□□□□ 0.2
PTCD2Q8WV60 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 SPDYE14P-201ENST00000442619 822 ntBASIC16.32■□□□□ 0.2
PTCD2Q8WV60 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 AC144521.1-201ENST00000607148 956 ntBASIC16.32■□□□□ 0.2
PTCD2Q8WV60 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 AC084121.4-201ENST00000641598 221 ntBASIC16.32■□□□□ 0.2
PTCD2Q8WV60 AF228730.8-201ENST00000642140 221 ntBASIC16.32■□□□□ 0.2
PTCD2Q8WV60 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCD2Q8WV60 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AC142381.1-201ENST00000426099 345 ntBASIC16.31■□□□□ 0.2
PTCD2Q8WV60 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AC026150.2-201ENST00000564693 1156 ntBASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AL353708.1-201ENST00000567904 1257 ntBASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AC024267.1-201ENST00000582320 895 ntBASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 AC008741.2-201ENST00000612792 3115 ntBASIC16.31■□□□□ 0.2
PTCD2Q8WV60 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms