Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 HYMAI-201ENST00000635591 3347 ntBASIC17.1■□□□□ 0.33
LMO3Q8TAP4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 AC015911.4-201ENST00000588022 1070 ntBASIC17.1■□□□□ 0.33
LMO3Q8TAP4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMO3Q8TAP4 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 AC074338.1-201ENST00000416825 156 ntBASIC17.09■□□□□ 0.33
LMO3Q8TAP4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 AC051619.7-201ENST00000568314 623 ntBASIC17.09■□□□□ 0.33
LMO3Q8TAP4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 AC112693.3-201ENST00000624819 1983 ntBASIC17.09■□□□□ 0.33
LMO3Q8TAP4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMO3Q8TAP4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LMO3Q8TAP4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LMO3Q8TAP4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.08■□□□□ 0.33
LMO3Q8TAP4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.08■□□□□ 0.33
LMO3Q8TAP4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LMO3Q8TAP4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LMO3Q8TAP4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.08■□□□□ 0.33
LMO3Q8TAP4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 TARDBPP1-201ENST00000442013 1203 ntBASIC17.08■□□□□ 0.32
LMO3Q8TAP4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 AL589739.1-201ENST00000607720 493 ntBASIC17.08■□□□□ 0.32
LMO3Q8TAP4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 AC079781.4-201ENST00000641908 219 ntBASIC17.08■□□□□ 0.32
LMO3Q8TAP4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
LMO3Q8TAP4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms