Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.8■□□□□ 0.76
COL23A1Q86Y22 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 HLA-A-202ENST00000376806 1854 ntBASIC19.79■□□□□ 0.76
COL23A1Q86Y22 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 AL133499.1-201ENST00000596207 608 ntBASIC19.79■□□□□ 0.76
COL23A1Q86Y22 AC007663.3-201ENST00000609632 465 ntBASIC19.79■□□□□ 0.76
COL23A1Q86Y22 AL354989.2-201ENST00000435838 1540 ntBASIC19.79■□□□□ 0.76
COL23A1Q86Y22 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL23A1Q86Y22 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 TUBBP5-203ENST00000508529 1334 ntBASIC19.78■□□□□ 0.76
COL23A1Q86Y22 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 AC008267.1-201ENST00000474858 1069 ntBASIC19.78■□□□□ 0.76
COL23A1Q86Y22 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 SERPINA13P-202ENST00000478994 924 ntBASIC19.78■□□□□ 0.76
COL23A1Q86Y22 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 PRKXP1-201ENST00000561423 1122 ntBASIC19.78■□□□□ 0.76
COL23A1Q86Y22 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 RN7SL574P-201ENST00000581512 297 ntBASIC19.78■□□□□ 0.76
COL23A1Q86Y22 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 AL138799.1-201ENST00000448213 1675 ntBASIC19.78■□□□□ 0.76
COL23A1Q86Y22 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.78■□□□□ 0.76
COL23A1Q86Y22 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 RN7SL774P-201ENST00000577467 290 ntBASIC19.77■□□□□ 0.76
COL23A1Q86Y22 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL23A1Q86Y22 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
COL23A1Q86Y22 AC141586.5-201ENST00000624546 2050 ntBASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms