Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM50Q86XT4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.83■□□□□ 0.45
TRIM50Q86XT4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM50Q86XT4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM50Q86XT4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM50Q86XT4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.83■□□□□ 0.45
TRIM50Q86XT4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM50Q86XT4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 MEP1AP4-201ENST00000423244 1087 ntBASIC17.83■□□□□ 0.44
TRIM50Q86XT4 TIMM17BP1-201ENST00000545713 516 ntBASIC17.83■□□□□ 0.44
TRIM50Q86XT4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM50Q86XT4 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.82■□□□□ 0.44
TRIM50Q86XT4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 PRORSD1P-202ENST00000563365 2154 ntBASIC17.82■□□□□ 0.44
TRIM50Q86XT4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 AC093726.1-201ENST00000608064 963 ntBASIC17.82■□□□□ 0.44
TRIM50Q86XT4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
TRIM50Q86XT4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 RN7SL837P-201ENST00000463010 287 ntBASIC17.81■□□□□ 0.44
TRIM50Q86XT4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 HILS1-202ENST00000545329 423 ntBASIC17.81■□□□□ 0.44
TRIM50Q86XT4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 AL008721.1-201ENST00000609964 604 ntBASIC17.81■□□□□ 0.44
TRIM50Q86XT4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 CDC14C-201ENST00000428251 1719 ntBASIC17.81■□□□□ 0.44
TRIM50Q86XT4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM50Q86XT4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRIM50Q86XT4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms