Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 AC132938.2-201ENST00000579188 680 ntBASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 AL591163.1-201ENST00000641757 987 ntBASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBE3BQ7Z3V4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 AL607033.1-201ENST00000623900 1599 ntBASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 CLK3P2-201ENST00000427566 1453 ntBASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 AC018695.7-201ENST00000624587 2492 ntBASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 CDC14C-201ENST00000428251 1719 ntBASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE3BQ7Z3V4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms