Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 HLA-H-201ENST00000383620 1096 ntBASIC16.87■□□□□ 0.29
RNF43Q68DV7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 CR383656.12-201ENST00000549567 513 ntBASIC16.87■□□□□ 0.29
RNF43Q68DV7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.87■□□□□ 0.29
RNF43Q68DV7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RNF43Q68DV7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF43Q68DV7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 GGT3P-204ENST00000453783 1664 ntBASIC16.86■□□□□ 0.29
RNF43Q68DV7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 CRB3P1-201ENST00000449338 276 ntBASIC16.86■□□□□ 0.29
RNF43Q68DV7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 AC007967.4-201ENST00000614700 386 ntBASIC16.86■□□□□ 0.29
RNF43Q68DV7 MIR6752-201ENST00000618442 71 ntBASIC16.86■□□□□ 0.29
RNF43Q68DV7 AC022532.1-201ENST00000624563 1728 ntBASIC16.86■□□□□ 0.29
RNF43Q68DV7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF43Q68DV7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 FER1L4-210ENST00000615531 5998 ntBASIC16.86■□□□□ 0.29
RNF43Q68DV7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF43Q68DV7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF43Q68DV7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.85■□□□□ 0.29
RNF43Q68DV7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.85■□□□□ 0.29
RNF43Q68DV7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF43Q68DV7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF43Q68DV7 AC018529.1-201ENST00000613063 361 ntBASIC16.85■□□□□ 0.29
RNF43Q68DV7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF43Q68DV7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF43Q68DV7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RNF43Q68DV7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF43Q68DV7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF43Q68DV7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms