Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 AC106820.3-201ENST00000561653 397 ntBASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPAQ5VT25 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 CSH2-202ENST00000345366 598 ntTSL 5 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 SDHD-202ENST00000525291 790 ntTSL 3 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 KRT8P14-201ENST00000414254 1442 ntBASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPAQ5VT25 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 AC079178.1-201ENST00000420915 656 ntBASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 RNA5SP486-201ENST00000515961 83 ntBASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 AC138028.6-201ENST00000616106 1482 ntBASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 SP100-205ENST00000409824 1802 ntTSL 5 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDC42BPAQ5VT25 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 HLA-DPB2-205ENST00000435074 1188 ntBASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 ETV2-208ENST00000621247 941 ntTSL 5 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 PRSS30P-206ENST00000641773 873 ntBASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 AC005730.2-201ENST00000564549 1184 ntBASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDC42BPAQ5VT25 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms