Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.38□□□□□ -0.11
RNFT1Q5M7Z0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNFT1Q5M7Z0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 REXO1L1P-202ENST00000608646 1974 ntBASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 PHKG1P2-201ENST00000457537 863 ntBASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 AP001282.1-201ENST00000531301 1499 ntBASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.37□□□□□ -0.11
RNFT1Q5M7Z0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 NKILA-202ENST00000614771 2598 ntBASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AC006449.6-201ENST00000612330 2296 ntBASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AC092364.2-201ENST00000596710 2692 ntBASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 MTND4LP12-201ENST00000448237 295 ntBASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 RAB43P1-201ENST00000561790 589 ntBASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AC106886.1-201ENST00000568660 600 ntBASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 MIR6752-201ENST00000618442 71 ntBASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.36□□□□□ -0.11
RNFT1Q5M7Z0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RNFT1Q5M7Z0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNFT1Q5M7Z0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.35□□□□□ -0.11
RNFT1Q5M7Z0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNFT1Q5M7Z0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.35□□□□□ -0.11
RNFT1Q5M7Z0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
RNFT1Q5M7Z0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.35□□□□□ -0.11
RNFT1Q5M7Z0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms