Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.55■□□□□ 0.56
SHROOM1Q2M3G4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 PDIA3P1-201ENST00000471856 1510 ntBASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 AC234783.1-201ENST00000441761 496 ntBASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 AL049840.4-201ENST00000602422 811 ntBASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 MIR6799-201ENST00000620297 69 ntBASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.54■□□□□ 0.56
SHROOM1Q2M3G4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 KRT223P-202ENST00000449164 1292 ntBASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 TDH-203ENST00000531764 1110 ntBASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 CLUHP6-201ENST00000580789 941 ntBASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 AC015936.2-201ENST00000593177 259 ntBASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 AC133539.2-201ENST00000604757 467 ntBASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 INTS4P2-202ENST00000614726 2019 ntBASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHROOM1Q2M3G4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms