Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 AC006449.5-201ENST00000610658 2098 ntBASIC19.04■□□□□ 0.64
PDS5AQ29RF7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDS5AQ29RF7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 AC092364.2-201ENST00000596710 2692 ntBASIC19.03■□□□□ 0.64
PDS5AQ29RF7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 TMEM14DP-201ENST00000422205 345 ntBASIC19.03■□□□□ 0.64
PDS5AQ29RF7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 USP32P1-208ENST00000506594 1164 ntBASIC19.03■□□□□ 0.64
PDS5AQ29RF7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 AL359711.2-201ENST00000563105 872 ntBASIC19.03■□□□□ 0.64
PDS5AQ29RF7 AC120045.2-201ENST00000567334 178 ntBASIC19.03■□□□□ 0.64
PDS5AQ29RF7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 AC008735.3-201ENST00000596646 500 ntBASIC19.03■□□□□ 0.64
PDS5AQ29RF7 AC010319.3-201ENST00000597028 470 ntBASIC19.03■□□□□ 0.64
PDS5AQ29RF7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 KRT8P22-201ENST00000562317 1415 ntBASIC19.03■□□□□ 0.64
PDS5AQ29RF7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
PDS5AQ29RF7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 TNRC18P3-201ENST00000441896 2691 ntBASIC19.02■□□□□ 0.64
PDS5AQ29RF7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 MIR5189-201ENST00000577370 114 ntBASIC19.02■□□□□ 0.64
PDS5AQ29RF7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 LINC02447-202ENST00000501888 2146 ntBASIC19.02■□□□□ 0.64
PDS5AQ29RF7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.02■□□□□ 0.64
PDS5AQ29RF7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDS5AQ29RF7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.02■□□□□ 0.63
PDS5AQ29RF7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
PDS5AQ29RF7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDS5AQ29RF7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
PDS5AQ29RF7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 AC134915.1-201ENST00000426461 574 ntBASIC19.01■□□□□ 0.63
PDS5AQ29RF7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 ACTG1P3-201ENST00000431775 1114 ntBASIC19.01■□□□□ 0.63
PDS5AQ29RF7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 ACA64.2-201ENST00000459014 129 ntBASIC19.01■□□□□ 0.63
PDS5AQ29RF7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.01■□□□□ 0.63
PDS5AQ29RF7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms