Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PCDH1Q08174 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH1Q08174 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PCDH1Q08174 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 AC004461.1-201ENST00000412461 403 ntBASIC15.48■□□□□ 0.07
PCDH1Q08174 UPF3AP3-201ENST00000420996 769 ntBASIC15.48■□□□□ 0.07
PCDH1Q08174 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH1Q08174 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDH1Q08174 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDH1Q08174 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.48■□□□□ 0.07
PCDH1Q08174 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH1Q08174 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDH1Q08174 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
PCDH1Q08174 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDH1Q08174 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDH1Q08174 AC093520.2-201ENST00000561830 333 ntBASIC15.48■□□□□ 0.07
PCDH1Q08174 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.48■□□□□ 0.07
PCDH1Q08174 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDH1Q08174 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDH1Q08174 AC079416.2-201ENST00000625035 1193 ntBASIC15.48■□□□□ 0.07
PCDH1Q08174 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH1Q08174 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH1Q08174 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH1Q08174 AL136982.4-201ENST00000437689 1740 ntBASIC15.48■□□□□ 0.07
PCDH1Q08174 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH1Q08174 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH1Q08174 UXT-AS1-201ENST00000590504 1525 ntBASIC15.48■□□□□ 0.07
PCDH1Q08174 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH1Q08174 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH1Q08174 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH1Q08174 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH1Q08174 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.47■□□□□ 0.07
PCDH1Q08174 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH1Q08174 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDH1Q08174 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH1Q08174 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH1Q08174 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH1Q08174 AL627223.1-201ENST00000416693 442 ntBASIC15.47■□□□□ 0.07
PCDH1Q08174 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH1Q08174 BX842568.4-201ENST00000421222 227 ntBASIC15.47■□□□□ 0.07
PCDH1Q08174 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 GPS2P2-201ENST00000430745 888 ntBASIC15.47■□□□□ 0.07
PCDH1Q08174 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH1Q08174 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH1Q08174 ALG1L8P-201ENST00000533887 760 ntBASIC15.47■□□□□ 0.07
PCDH1Q08174 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDH1Q08174 AC092865.5-201ENST00000545435 363 ntBASIC15.47■□□□□ 0.07
PCDH1Q08174 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH1Q08174 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH1Q08174 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH1Q08174 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH1Q08174 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDH1Q08174 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH1Q08174 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDH1Q08174 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
PCDH1Q08174 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PCDH1Q08174 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH1Q08174 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDH1Q08174 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH1Q08174 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 AC068587.6-202ENST00000641839 5619 ntBASIC15.46■□□□□ 0.07
PCDH1Q08174 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH1Q08174 CYP4F24P-201ENST00000586049 1580 ntBASIC15.46■□□□□ 0.07
PCDH1Q08174 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDH1Q08174 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH1Q08174 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
PCDH1Q08174 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDH1Q08174 FAM58DP-201ENST00000428076 619 ntBASIC15.46■□□□□ 0.07
PCDH1Q08174 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms