Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.12■□□□□ 0.33
CDR2Q01850 AC022145.2-201ENST00000598203 171 ntBASIC17.12■□□□□ 0.33
CDR2Q01850 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.12■□□□□ 0.33
CDR2Q01850 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDR2Q01850 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDR2Q01850 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CDR2Q01850 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDR2Q01850 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDR2Q01850 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDR2Q01850 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDR2Q01850 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.12■□□□□ 0.33
CDR2Q01850 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.12■□□□□ 0.33
CDR2Q01850 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.12■□□□□ 0.33
CDR2Q01850 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDR2Q01850 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDR2Q01850 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.12■□□□□ 0.33
CDR2Q01850 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.12■□□□□ 0.33
CDR2Q01850 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 AP3S2-216ENST00000617003 1561 ntBASIC17.11■□□□□ 0.33
CDR2Q01850 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.11■□□□□ 0.33
CDR2Q01850 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.11■□□□□ 0.33
CDR2Q01850 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 AC004987.2-201ENST00000395959 1148 ntBASIC17.11■□□□□ 0.33
CDR2Q01850 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.11■□□□□ 0.33
CDR2Q01850 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
CDR2Q01850 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.11■□□□□ 0.33
CDR2Q01850 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.11■□□□□ 0.33
CDR2Q01850 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.11■□□□□ 0.33
CDR2Q01850 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDR2Q01850 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.11■□□□□ 0.33
CDR2Q01850 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.11■□□□□ 0.33
CDR2Q01850 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.11■□□□□ 0.33
CDR2Q01850 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.11■□□□□ 0.33
CDR2Q01850 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.11■□□□□ 0.33
CDR2Q01850 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.11■□□□□ 0.33
CDR2Q01850 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CDR2Q01850 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDR2Q01850 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CDR2Q01850 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDR2Q01850 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDR2Q01850 AC092384.3-202ENST00000564646 2873 ntBASIC17.11■□□□□ 0.33
CDR2Q01850 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.1■□□□□ 0.33
CDR2Q01850 AL136982.4-201ENST00000437689 1740 ntBASIC17.1■□□□□ 0.33
CDR2Q01850 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CDR2Q01850 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.1■□□□□ 0.33
CDR2Q01850 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.1■□□□□ 0.33
CDR2Q01850 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.1■□□□□ 0.33
CDR2Q01850 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.1■□□□□ 0.33
CDR2Q01850 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.1■□□□□ 0.33
CDR2Q01850 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.1■□□□□ 0.33
CDR2Q01850 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 AC055717.3-201ENST00000622967 595 ntBASIC17.1■□□□□ 0.33
CDR2Q01850 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.1■□□□□ 0.33
CDR2Q01850 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.1■□□□□ 0.33
CDR2Q01850 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDR2Q01850 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CDR2Q01850 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.09■□□□□ 0.33
CDR2Q01850 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDR2Q01850 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.09■□□□□ 0.33
CDR2Q01850 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms