Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 AL354751.1-201ENST00000412768 1863 ntBASIC18.18■□□□□ 0.5
HTRA3P83110 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HTRA3P83110 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HTRA3P83110 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.18■□□□□ 0.5
HTRA3P83110 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.18■□□□□ 0.5
HTRA3P83110 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 RPL8P2-201ENST00000430538 502 ntBASIC18.18■□□□□ 0.5
HTRA3P83110 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC18.18■□□□□ 0.5
HTRA3P83110 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 AC243562.2-201ENST00000561247 970 ntBASIC18.18■□□□□ 0.5
HTRA3P83110 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.18■□□□□ 0.5
HTRA3P83110 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.18■□□□□ 0.5
HTRA3P83110 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.18■□□□□ 0.5
HTRA3P83110 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.18■□□□□ 0.5
HTRA3P83110 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
HTRA3P83110 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.18■□□□□ 0.5
HTRA3P83110 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTRA3P83110 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.18■□□□□ 0.5
HTRA3P83110 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.18■□□□□ 0.5
HTRA3P83110 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HTRA3P83110 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.17■□□□□ 0.5
HTRA3P83110 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.17■□□□□ 0.5
HTRA3P83110 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.17■□□□□ 0.5
HTRA3P83110 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HTRA3P83110 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC18.17■□□□□ 0.5
HTRA3P83110 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.17■□□□□ 0.5
HTRA3P83110 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
HTRA3P83110 ENPP7P14-201ENST00000621765 1040 ntBASIC18.17■□□□□ 0.5
HTRA3P83110 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 AL391256.1-201ENST00000443260 1855 ntBASIC18.17■□□□□ 0.5
HTRA3P83110 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HTRA3P83110 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HTRA3P83110 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTRA3P83110 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.17■□□□□ 0.5
HTRA3P83110 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
HTRA3P83110 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HTRA3P83110 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.17■□□□□ 0.5
HTRA3P83110 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.16■□□□□ 0.5
HTRA3P83110 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
HTRA3P83110 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.16■□□□□ 0.5
HTRA3P83110 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.16■□□□□ 0.5
HTRA3P83110 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.16■□□□□ 0.5
HTRA3P83110 AC090164.2-201ENST00000611487 516 ntBASIC18.16■□□□□ 0.5
HTRA3P83110 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HTRA3P83110 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HTRA3P83110 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HTRA3P83110 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HTRA3P83110 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HTRA3P83110 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HTRA3P83110 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HTRA3P83110 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.16■□□□□ 0.5
HTRA3P83110 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.16■□□□□ 0.5
HTRA3P83110 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.16■□□□□ 0.5
HTRA3P83110 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HTRA3P83110 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HTRA3P83110 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.16■□□□□ 0.5
HTRA3P83110 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.16■□□□□ 0.5
HTRA3P83110 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HTRA3P83110 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HTRA3P83110 HLA-A-202ENST00000376806 1854 ntBASIC18.16■□□□□ 0.5
HTRA3P83110 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTRA3P83110 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms