Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.36■□□□□ 0.37
SNRPFP62306 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRPFP62306 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SNRPFP62306 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRPFP62306 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 AC092580.3-201ENST00000430932 139 ntBASIC17.35■□□□□ 0.37
SNRPFP62306 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 RN7SL618P-201ENST00000477850 296 ntBASIC17.35■□□□□ 0.37
SNRPFP62306 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.35■□□□□ 0.37
SNRPFP62306 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SNRPFP62306 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.35■□□□□ 0.37
SNRPFP62306 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRPFP62306 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRPFP62306 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRPFP62306 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNRPFP62306 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRPFP62306 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.35■□□□□ 0.37
SNRPFP62306 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRPFP62306 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRPFP62306 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.34■□□□□ 0.37
SNRPFP62306 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.34■□□□□ 0.37
SNRPFP62306 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.34■□□□□ 0.37
SNRPFP62306 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.34■□□□□ 0.37
SNRPFP62306 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.34■□□□□ 0.37
SNRPFP62306 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.34■□□□□ 0.37
SNRPFP62306 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.34■□□□□ 0.37
SNRPFP62306 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.34■□□□□ 0.37
SNRPFP62306 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SNRPFP62306 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.34■□□□□ 0.37
SNRPFP62306 AC025048.3-201ENST00000590609 569 ntBASIC17.34■□□□□ 0.37
SNRPFP62306 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.34■□□□□ 0.37
SNRPFP62306 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.34■□□□□ 0.37
SNRPFP62306 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SNRPFP62306 AC005702.4-201ENST00000618393 416 ntBASIC17.34■□□□□ 0.37
SNRPFP62306 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SNRPFP62306 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRPFP62306 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPFP62306 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.33■□□□□ 0.37
SNRPFP62306 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPFP62306 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.33■□□□□ 0.37
SNRPFP62306 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.33■□□□□ 0.37
SNRPFP62306 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
SNRPFP62306 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPFP62306 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPFP62306 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPFP62306 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.33■□□□□ 0.37
SNRPFP62306 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPFP62306 AL607033.1-201ENST00000623900 1599 ntBASIC17.33■□□□□ 0.37
SNRPFP62306 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPFP62306 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNRPFP62306 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SNRPFP62306 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNRPFP62306 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNRPFP62306 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNRPFP62306 MIR943-201ENST00000401286 94 ntBASIC17.33■□□□□ 0.36
SNRPFP62306 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.33■□□□□ 0.36
SNRPFP62306 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.33■□□□□ 0.36
SNRPFP62306 TARDBPP1-201ENST00000442013 1203 ntBASIC17.33■□□□□ 0.36
SNRPFP62306 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNRPFP62306 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms