Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SEC61A1P61619 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SEC61A1P61619 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SEC61A1P61619 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.13□□□□□ -0.15
SEC61A1P61619 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 RPS8P6-201ENST00000426177 609 ntBASIC14.13□□□□□ -0.15
SEC61A1P61619 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.13□□□□□ -0.15
SEC61A1P61619 AL513480.1-201ENST00000451731 511 ntBASIC14.13□□□□□ -0.15
SEC61A1P61619 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.13□□□□□ -0.15
SEC61A1P61619 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.13□□□□□ -0.15
SEC61A1P61619 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
SEC61A1P61619 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.13□□□□□ -0.15
SEC61A1P61619 AC023141.13-201ENST00000604991 943 ntBASIC14.13□□□□□ -0.15
SEC61A1P61619 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.13□□□□□ -0.15
SEC61A1P61619 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.13□□□□□ -0.15
SEC61A1P61619 PPT1-215ENST00000641471 2368 ntBASIC14.13□□□□□ -0.15
SEC61A1P61619 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.13□□□□□ -0.15
SEC61A1P61619 AC104581.4-201ENST00000623126 3052 ntBASIC14.13□□□□□ -0.15
SEC61A1P61619 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SEC61A1P61619 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61A1P61619 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SEC61A1P61619 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SEC61A1P61619 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.12□□□□□ -0.15
SEC61A1P61619 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.12□□□□□ -0.15
SEC61A1P61619 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SEC61A1P61619 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.12□□□□□ -0.15
SEC61A1P61619 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.12□□□□□ -0.15
SEC61A1P61619 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
SEC61A1P61619 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.12□□□□□ -0.15
SEC61A1P61619 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SEC61A1P61619 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SEC61A1P61619 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.12□□□□□ -0.15
SEC61A1P61619 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SEC61A1P61619 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.12□□□□□ -0.15
SEC61A1P61619 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.12□□□□□ -0.15
SEC61A1P61619 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SEC61A1P61619 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.12□□□□□ -0.15
SEC61A1P61619 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.12□□□□□ -0.15
SEC61A1P61619 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SEC61A1P61619 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.12□□□□□ -0.15
SEC61A1P61619 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.12□□□□□ -0.15
SEC61A1P61619 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
SEC61A1P61619 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.12□□□□□ -0.15
SEC61A1P61619 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.12□□□□□ -0.15
SEC61A1P61619 AC007064.4-201ENST00000637740 555 ntBASIC14.12□□□□□ -0.15
SEC61A1P61619 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SEC61A1P61619 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SEC61A1P61619 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.12□□□□□ -0.15
SEC61A1P61619 CICP4-201ENST00000447359 2812 ntBASIC14.12□□□□□ -0.15
SEC61A1P61619 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.12□□□□□ -0.15
SEC61A1P61619 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61A1P61619 AC092919.2-201ENST00000623631 1645 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms