Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN20P56880 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 LINC01144-201ENST00000626198 1710 ntBASIC14.76□□□□□ -0.05
CLDN20P56880 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.76□□□□□ -0.05
CLDN20P56880 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN20P56880 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN20P56880 SPDYE14P-201ENST00000442619 822 ntBASIC14.76□□□□□ -0.05
CLDN20P56880 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN20P56880 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
CLDN20P56880 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLDN20P56880 ALG1L8P-201ENST00000533887 760 ntBASIC14.76□□□□□ -0.05
CLDN20P56880 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN20P56880 AC026150.2-201ENST00000564693 1156 ntBASIC14.76□□□□□ -0.05
CLDN20P56880 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN20P56880 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN20P56880 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN20P56880 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN20P56880 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CLDN20P56880 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CLDN20P56880 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CLDN20P56880 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CLDN20P56880 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 AC005622.1-201ENST00000636801 1703 ntBASIC14.75□□□□□ -0.05
CLDN20P56880 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN20P56880 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.75□□□□□ -0.05
CLDN20P56880 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLDN20P56880 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.75□□□□□ -0.05
CLDN20P56880 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN20P56880 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN20P56880 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.75□□□□□ -0.05
CLDN20P56880 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLDN20P56880 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN20P56880 AC025678.2-201ENST00000562061 970 ntBASIC14.75□□□□□ -0.05
CLDN20P56880 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN20P56880 SPTSSB-204ENST00000617024 1292 ntBASIC14.75□□□□□ -0.05
CLDN20P56880 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN20P56880 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CLDN20P56880 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN20P56880 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLDN20P56880 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN20P56880 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.74□□□□□ -0.05
CLDN20P56880 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 AC013268.4-201ENST00000637413 2228 ntBASIC14.74□□□□□ -0.05
CLDN20P56880 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN20P56880 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.74□□□□□ -0.05
CLDN20P56880 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms