Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.03□□□□□ -0.16
FOXG1P55316 AC092364.2-202ENST00000597012 1073 ntBASIC14.03□□□□□ -0.16
FOXG1P55316 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
FOXG1P55316 AC005702.4-201ENST00000618393 416 ntBASIC14.03□□□□□ -0.16
FOXG1P55316 MIR6069-201ENST00000620069 79 ntBASIC14.03□□□□□ -0.16
FOXG1P55316 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
FOXG1P55316 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXG1P55316 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXG1P55316 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FOXG1P55316 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
FOXG1P55316 AC008894.3-201ENST00000624324 3103 ntBASIC14.03□□□□□ -0.16
FOXG1P55316 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
FOXG1P55316 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXG1P55316 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXG1P55316 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
FOXG1P55316 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXG1P55316 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXG1P55316 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXG1P55316 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXG1P55316 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXG1P55316 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXG1P55316 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
FOXG1P55316 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXG1P55316 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.02□□□□□ -0.17
FOXG1P55316 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXG1P55316 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
FOXG1P55316 AC002472.2-201ENST00000442739 958 ntBASIC14.02□□□□□ -0.17
FOXG1P55316 SERBP1P3-201ENST00000459980 809 ntBASIC14.02□□□□□ -0.17
FOXG1P55316 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXG1P55316 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXG1P55316 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.02□□□□□ -0.17
FOXG1P55316 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.02□□□□□ -0.17
FOXG1P55316 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.02□□□□□ -0.17
FOXG1P55316 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
FOXG1P55316 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
FOXG1P55316 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXG1P55316 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.02□□□□□ -0.17
FOXG1P55316 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXG1P55316 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
FOXG1P55316 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.01□□□□□ -0.17
FOXG1P55316 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXG1P55316 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FOXG1P55316 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
FOXG1P55316 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXG1P55316 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXG1P55316 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 FO393414.2-201ENST00000405153 598 ntBASIC14.01□□□□□ -0.17
FOXG1P55316 AC074338.1-201ENST00000416825 156 ntBASIC14.01□□□□□ -0.17
FOXG1P55316 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXG1P55316 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXG1P55316 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXG1P55316 AL589987.1-201ENST00000453380 819 ntBASIC14.01□□□□□ -0.17
FOXG1P55316 PHKG1P2-201ENST00000457537 863 ntBASIC14.01□□□□□ -0.17
FOXG1P55316 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXG1P55316 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.01□□□□□ -0.17
FOXG1P55316 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXG1P55316 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXG1P55316 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXG1P55316 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.01□□□□□ -0.17
FOXG1P55316 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXG1P55316 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms