Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH4P55283 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDH4P55283 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDH4P55283 AL391005.1-201ENST00000623953 2435 ntBASIC16.34■□□□□ 0.21
CDH4P55283 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 MIR661-201ENST00000384842 89 ntBASIC16.34■□□□□ 0.21
CDH4P55283 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.34■□□□□ 0.21
CDH4P55283 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH4P55283 AC002472.2-201ENST00000442739 958 ntBASIC16.34■□□□□ 0.21
CDH4P55283 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDH4P55283 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH4P55283 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH4P55283 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH4P55283 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.34■□□□□ 0.21
CDH4P55283 MIR3197-201ENST00000582241 73 ntBASIC16.34■□□□□ 0.21
CDH4P55283 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CDH4P55283 LINC02560-201ENST00000596379 459 ntBASIC16.34■□□□□ 0.21
CDH4P55283 AC008761.3-201ENST00000624803 892 ntBASIC16.34■□□□□ 0.21
CDH4P55283 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH4P55283 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH4P55283 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CDH4P55283 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.34■□□□□ 0.21
CDH4P55283 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH4P55283 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH4P55283 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH4P55283 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.33■□□□□ 0.21
CDH4P55283 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH4P55283 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH4P55283 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.33■□□□□ 0.21
CDH4P55283 AC026691.1-201ENST00000602502 2017 ntBASIC16.33■□□□□ 0.21
CDH4P55283 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH4P55283 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CDH4P55283 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH4P55283 NFIC-211ENST00000641145 8399 ntBASIC16.33■□□□□ 0.2
CDH4P55283 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH4P55283 AC236430.1-201ENST00000402231 743 ntBASIC16.33■□□□□ 0.2
CDH4P55283 AC136604.1-201ENST00000418535 575 ntBASIC16.33■□□□□ 0.2
CDH4P55283 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH4P55283 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH4P55283 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH4P55283 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH4P55283 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH4P55283 SERBP1P5-201ENST00000510079 1181 ntBASIC16.33■□□□□ 0.2
CDH4P55283 HNRNPUP1-201ENST00000554987 333 ntBASIC16.33■□□□□ 0.2
CDH4P55283 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH4P55283 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDH4P55283 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH4P55283 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH4P55283 AC004461.2-201ENST00000629517 803 ntBASIC16.33■□□□□ 0.2
CDH4P55283 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDH4P55283 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH4P55283 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH4P55283 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDH4P55283 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH4P55283 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CDH4P55283 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CDH4P55283 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH4P55283 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDH4P55283 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH4P55283 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CDH4P55283 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDH4P55283 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
CDH4P55283 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CDH4P55283 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms