Protein–RNA interactions for Protein: P42677

RPS27, 40S ribosomal protein S27, humanhuman

Known RBP Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27P42677 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS27P42677 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RPS27P42677 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPS27P42677 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPS27P42677 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RPS27P42677 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.28□□□□□ -0.12
RPS27P42677 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.28□□□□□ -0.12
RPS27P42677 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.28□□□□□ -0.12
RPS27P42677 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.28□□□□□ -0.12
RPS27P42677 AL365330.1-201ENST00000607459 531 ntBASIC14.28□□□□□ -0.12
RPS27P42677 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 AC018892.3-201ENST00000623986 2499 ntBASIC14.28□□□□□ -0.12
RPS27P42677 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
RPS27P42677 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 LINC02228-204ENST00000642115 2962 ntBASIC14.28□□□□□ -0.12
RPS27P42677 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RPS27P42677 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS27P42677 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.27□□□□□ -0.12
RPS27P42677 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.27□□□□□ -0.12
RPS27P42677 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.27□□□□□ -0.12
RPS27P42677 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
RPS27P42677 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RPS27P42677 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 ZNF259P1-201ENST00000407656 1365 ntBASIC14.27□□□□□ -0.12
RPS27P42677 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPS27P42677 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RPS27P42677 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RPS27P42677 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.27□□□□□ -0.13
RPS27P42677 MED15P5-201ENST00000423150 992 ntBASIC14.27□□□□□ -0.13
RPS27P42677 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.27□□□□□ -0.13
RPS27P42677 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.27□□□□□ -0.13
RPS27P42677 MIR4321-201ENST00000592276 80 ntBASIC14.27□□□□□ -0.13
RPS27P42677 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.27□□□□□ -0.13
RPS27P42677 AL161645.1-201ENST00000622716 1255 ntBASIC14.27□□□□□ -0.13
RPS27P42677 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.27□□□□□ -0.13
RPS27P42677 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RPS27P42677 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.27□□□□□ -0.13
RPS27P42677 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.27□□□□□ -0.13
RPS27P42677 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RPS27P42677 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.27□□□□□ -0.13
RPS27P42677 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RPS27P42677 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPS27P42677 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RPS27P42677 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS27P42677 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RPS27P42677 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPS27P42677 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms