Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MMP11P24347 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MMP11P24347 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.24■□□□□ 0.03
MMP11P24347 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MMP11P24347 AC087499.5-201ENST00000452760 1342 ntBASIC15.24■□□□□ 0.03
MMP11P24347 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MMP11P24347 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP11P24347 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP11P24347 AC011270.2-201ENST00000624293 2550 ntBASIC15.24■□□□□ 0.03
MMP11P24347 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
MMP11P24347 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 RPL37AP1-201ENST00000412502 279 ntBASIC15.24■□□□□ 0.03
MMP11P24347 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.24■□□□□ 0.03
MMP11P24347 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MMP11P24347 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP11P24347 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
MMP11P24347 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.24■□□□□ 0.03
MMP11P24347 AL133215.2-201ENST00000609242 977 ntBASIC15.24■□□□□ 0.03
MMP11P24347 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MMP11P24347 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MMP11P24347 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP11P24347 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP11P24347 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP11P24347 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.24■□□□□ 0.03
MMP11P24347 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
MMP11P24347 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP11P24347 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP11P24347 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP11P24347 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP11P24347 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP11P24347 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MMP11P24347 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP11P24347 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MMP11P24347 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.23■□□□□ 0.03
MMP11P24347 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.23■□□□□ 0.03
MMP11P24347 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.23■□□□□ 0.03
MMP11P24347 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.23■□□□□ 0.03
MMP11P24347 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP11P24347 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.23■□□□□ 0.03
MMP11P24347 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP11P24347 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 AL079307.3-201ENST00000556114 283 ntBASIC15.23■□□□□ 0.03
MMP11P24347 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.23■□□□□ 0.03
MMP11P24347 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.23■□□□□ 0.03
MMP11P24347 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.23■□□□□ 0.03
MMP11P24347 AC061975.2-201ENST00000581722 295 ntBASIC15.23■□□□□ 0.03
MMP11P24347 AC026979.3-201ENST00000607315 403 ntBASIC15.23■□□□□ 0.03
MMP11P24347 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP11P24347 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP11P24347 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MMP11P24347 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MMP11P24347 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP11P24347 LINC01144-201ENST00000626198 1710 ntBASIC15.23■□□□□ 0.03
MMP11P24347 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms