Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.4■□□□□ 0.54
SCG2P13521 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG2P13521 AL512361.1-201ENST00000554200 418 ntBASIC18.4■□□□□ 0.54
SCG2P13521 HNRNPUP1-201ENST00000554987 333 ntBASIC18.4■□□□□ 0.54
SCG2P13521 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.4■□□□□ 0.54
SCG2P13521 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.4■□□□□ 0.54
SCG2P13521 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.4■□□□□ 0.54
SCG2P13521 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.4■□□□□ 0.54
SCG2P13521 AL390754.1-201ENST00000619088 582 ntBASIC18.4■□□□□ 0.54
SCG2P13521 AL590560.3-201ENST00000623350 461 ntBASIC18.4■□□□□ 0.54
SCG2P13521 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG2P13521 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.4■□□□□ 0.54
SCG2P13521 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG2P13521 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG2P13521 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG2P13521 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SCG2P13521 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SCG2P13521 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SCG2P13521 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG2P13521 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SCG2P13521 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCG2P13521 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG2P13521 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SCG2P13521 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCG2P13521 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SCG2P13521 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.39■□□□□ 0.54
SCG2P13521 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCG2P13521 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCG2P13521 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.39■□□□□ 0.54
SCG2P13521 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.54
SCG2P13521 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SCG2P13521 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SCG2P13521 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SCG2P13521 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.39■□□□□ 0.53
SCG2P13521 TSSK5P-201ENST00000423978 907 ntBASIC18.39■□□□□ 0.53
SCG2P13521 AC241585.1-201ENST00000433527 519 ntBASIC18.39■□□□□ 0.53
SCG2P13521 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.39■□□□□ 0.53
SCG2P13521 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.39■□□□□ 0.53
SCG2P13521 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.39■□□□□ 0.53
SCG2P13521 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.39■□□□□ 0.53
SCG2P13521 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.39■□□□□ 0.53
SCG2P13521 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.39■□□□□ 0.53
SCG2P13521 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.39■□□□□ 0.53
SCG2P13521 MIR6069-201ENST00000620069 79 ntBASIC18.39■□□□□ 0.53
SCG2P13521 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.39■□□□□ 0.53
SCG2P13521 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SCG2P13521 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.39■□□□□ 0.53
SCG2P13521 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.39■□□□□ 0.53
SCG2P13521 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCG2P13521 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.39■□□□□ 0.53
SCG2P13521 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.38■□□□□ 0.53
SCG2P13521 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.38■□□□□ 0.53
SCG2P13521 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SCG2P13521 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.38■□□□□ 0.53
SCG2P13521 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.38■□□□□ 0.53
SCG2P13521 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.38■□□□□ 0.53
SCG2P13521 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.38■□□□□ 0.53
SCG2P13521 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.38■□□□□ 0.53
SCG2P13521 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.38■□□□□ 0.53
SCG2P13521 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCG2P13521 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.38■□□□□ 0.53
SCG2P13521 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SCG2P13521 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
SCG2P13521 AC010336.2-201ENST00000564226 506 ntBASIC18.38■□□□□ 0.53
SCG2P13521 AC097359.3-201ENST00000603982 1210 ntBASIC18.38■□□□□ 0.53
SCG2P13521 AL844908.2-201ENST00000609461 460 ntBASIC18.38■□□□□ 0.53
SCG2P13521 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms