Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC6P09630 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC6P09630 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXC6P09630 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXC6P09630 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC6P09630 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.96■□□□□ 0.47
HOXC6P09630 PHKG1P2-201ENST00000457537 863 ntBASIC17.96■□□□□ 0.47
HOXC6P09630 AC093433.1-201ENST00000458048 571 ntBASIC17.96■□□□□ 0.47
HOXC6P09630 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.96■□□□□ 0.47
HOXC6P09630 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC6P09630 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.96■□□□□ 0.47
HOXC6P09630 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC6P09630 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC6P09630 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HOXC6P09630 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC6P09630 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC6P09630 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC6P09630 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC6P09630 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
HOXC6P09630 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXC6P09630 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HOXC6P09630 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC6P09630 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXC6P09630 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.96■□□□□ 0.46
HOXC6P09630 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.96■□□□□ 0.46
HOXC6P09630 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HOXC6P09630 AP001282.1-201ENST00000531301 1499 ntBASIC17.95■□□□□ 0.46
HOXC6P09630 MSTO2P-201ENST00000314835 1709 ntBASIC17.95■□□□□ 0.46
HOXC6P09630 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HOXC6P09630 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC6P09630 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXC6P09630 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HOXC6P09630 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
HOXC6P09630 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HOXC6P09630 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 ACKR1-201ENST00000368121 1240 ntBASIC17.95■□□□□ 0.46
HOXC6P09630 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.95■□□□□ 0.46
HOXC6P09630 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 KRT90P-201ENST00000549264 1064 ntBASIC17.95■□□□□ 0.46
HOXC6P09630 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.95■□□□□ 0.46
HOXC6P09630 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXC6P09630 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXC6P09630 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.95■□□□□ 0.46
HOXC6P09630 RHOXF1P1-202ENST00000635473 501 ntBASIC17.95■□□□□ 0.46
HOXC6P09630 AC008687.7-202ENST00000637404 953 ntBASIC17.95■□□□□ 0.46
HOXC6P09630 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
HOXC6P09630 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
HOXC6P09630 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
HOXC6P09630 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC6P09630 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HOXC6P09630 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
HOXC6P09630 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXC6P09630 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HOXC6P09630 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXC6P09630 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXC6P09630 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXC6P09630 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXC6P09630 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HOXC6P09630 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXC6P09630 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXC6P09630 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 HAUS4P1-201ENST00000406739 1145 ntBASIC17.94■□□□□ 0.46
HOXC6P09630 AC026954.1-201ENST00000429771 1293 ntBASIC17.94■□□□□ 0.46
HOXC6P09630 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXC6P09630 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
HOXC6P09630 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.94■□□□□ 0.46
HOXC6P09630 AC106760.1-201ENST00000508690 800 ntBASIC17.94■□□□□ 0.46
HOXC6P09630 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXC6P09630 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXC6P09630 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXC6P09630 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HOXC6P09630 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
HOXC6P09630 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
HOXC6P09630 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXC6P09630 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms