Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.75■□□□□ 0.43
TPM1P09493 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.75■□□□□ 0.43
TPM1P09493 AC091304.2-201ENST00000564639 760 ntBASIC17.75■□□□□ 0.43
TPM1P09493 MIR4515-201ENST00000584082 81 ntBASIC17.75■□□□□ 0.43
TPM1P09493 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.75■□□□□ 0.43
TPM1P09493 REXO1L6P-202ENST00000619970 1078 ntBASIC17.75■□□□□ 0.43
TPM1P09493 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.75■□□□□ 0.43
TPM1P09493 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TPM1P09493 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.75■□□□□ 0.43
TPM1P09493 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.75■□□□□ 0.43
TPM1P09493 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TPM1P09493 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.75■□□□□ 0.43
TPM1P09493 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.75■□□□□ 0.43
TPM1P09493 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TPM1P09493 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM1P09493 AC087481.3-201ENST00000602886 1894 ntBASIC17.75■□□□□ 0.43
TPM1P09493 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TPM1P09493 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.75■□□□□ 0.43
TPM1P09493 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM1P09493 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM1P09493 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TPM1P09493 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.75■□□□□ 0.43
TPM1P09493 AC136621.1-201ENST00000624017 2304 ntBASIC17.75■□□□□ 0.43
TPM1P09493 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TPM1P09493 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TPM1P09493 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.75■□□□□ 0.43
TPM1P09493 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.74■□□□□ 0.43
TPM1P09493 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TPM1P09493 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.74■□□□□ 0.43
TPM1P09493 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.74■□□□□ 0.43
TPM1P09493 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 MRPL20P1-201ENST00000400819 433 ntBASIC17.74■□□□□ 0.43
TPM1P09493 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.74■□□□□ 0.43
TPM1P09493 KRT18P27-201ENST00000427733 1299 ntBASIC17.74■□□□□ 0.43
TPM1P09493 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.74■□□□□ 0.43
TPM1P09493 OR7E14P-202ENST00000530490 1290 ntBASIC17.74■□□□□ 0.43
TPM1P09493 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.74■□□□□ 0.43
TPM1P09493 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.74■□□□□ 0.43
TPM1P09493 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.74■□□□□ 0.43
TPM1P09493 AL031055.1-201ENST00000606362 631 ntBASIC17.74■□□□□ 0.43
TPM1P09493 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.74■□□□□ 0.43
TPM1P09493 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TPM1P09493 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.74■□□□□ 0.43
TPM1P09493 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TPM1P09493 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.74■□□□□ 0.43
TPM1P09493 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TPM1P09493 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TPM1P09493 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.74■□□□□ 0.43
TPM1P09493 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.74■□□□□ 0.43
TPM1P09493 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.74■□□□□ 0.43
TPM1P09493 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.74■□□□□ 0.43
TPM1P09493 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TPM1P09493 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM1P09493 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TPM1P09493 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.73■□□□□ 0.43
TPM1P09493 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
TPM1P09493 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.73■□□□□ 0.43
TPM1P09493 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM1P09493 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.73■□□□□ 0.43
TPM1P09493 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM1P09493 AC006486.2-201ENST00000624246 2199 ntBASIC17.73■□□□□ 0.43
TPM1P09493 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM1P09493 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.73■□□□□ 0.43
TPM1P09493 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM1P09493 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.73■□□□□ 0.43
TPM1P09493 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.73■□□□□ 0.43
TPM1P09493 RNU1-129P-201ENST00000384064 167 ntBASIC17.73■□□□□ 0.43
TPM1P09493 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.73■□□□□ 0.43
TPM1P09493 PMS2P4-201ENST00000412466 1052 ntBASIC17.73■□□□□ 0.43
TPM1P09493 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.73■□□□□ 0.43
TPM1P09493 FAM210CP-201ENST00000445714 574 ntBASIC17.73■□□□□ 0.43
TPM1P09493 SAPCD2P3-201ENST00000455031 850 ntBASIC17.73■□□□□ 0.43
TPM1P09493 IGHV3-65-201ENST00000523210 341 ntBASIC17.73■□□□□ 0.43
TPM1P09493 MIR3909-201ENST00000579518 119 ntBASIC17.73■□□□□ 0.43
TPM1P09493 U1.21-201ENST00000580816 167 ntBASIC17.73■□□□□ 0.43
TPM1P09493 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.73■□□□□ 0.43
TPM1P09493 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.73■□□□□ 0.43
TPM1P09493 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.73■□□□□ 0.43
TPM1P09493 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.73■□□□□ 0.43
TPM1P09493 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TPM1P09493 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TPM1P09493 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TPM1P09493 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms