Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CAPN1P07384 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN1P07384 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CAPN1P07384 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN1P07384 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CAPN1P07384 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.86■□□□□ 0.13
CAPN1P07384 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.86■□□□□ 0.13
CAPN1P07384 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
CAPN1P07384 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.86■□□□□ 0.13
CAPN1P07384 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 AC004449.1-201ENST00000564240 433 ntBASIC15.86■□□□□ 0.13
CAPN1P07384 AL135744.1-201ENST00000565098 629 ntBASIC15.86■□□□□ 0.13
CAPN1P07384 RARRES2P8-201ENST00000566335 367 ntBASIC15.86■□□□□ 0.13
CAPN1P07384 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.86■□□□□ 0.13
CAPN1P07384 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.86■□□□□ 0.13
CAPN1P07384 LINC00628-201ENST00000628516 1289 ntBASIC15.86■□□□□ 0.13
CAPN1P07384 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 AKAP8P1-201ENST00000434743 1349 ntBASIC15.86■□□□□ 0.13
CAPN1P07384 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CAPN1P07384 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
CAPN1P07384 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CAPN1P07384 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.85■□□□□ 0.13
CAPN1P07384 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.85■□□□□ 0.13
CAPN1P07384 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.85■□□□□ 0.13
CAPN1P07384 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CAPN1P07384 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.85■□□□□ 0.13
CAPN1P07384 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CAPN1P07384 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CAPN1P07384 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CAPN1P07384 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.85■□□□□ 0.13
CAPN1P07384 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.85■□□□□ 0.13
CAPN1P07384 AC092474.2-201ENST00000424288 719 ntBASIC15.85■□□□□ 0.13
CAPN1P07384 AC109635.5-201ENST00000533593 962 ntBASIC15.85■□□□□ 0.13
CAPN1P07384 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CAPN1P07384 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CAPN1P07384 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.85■□□□□ 0.13
CAPN1P07384 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms