Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM3P06753 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM3P06753 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM3P06753 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TPM3P06753 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM3P06753 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.06■□□□□ 0.48
TPM3P06753 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.06■□□□□ 0.48
TPM3P06753 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM3P06753 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM3P06753 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.06■□□□□ 0.48
TPM3P06753 AC087388.1-201ENST00000571370 1112 ntBASIC18.06■□□□□ 0.48
TPM3P06753 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TPM3P06753 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM3P06753 AP000550.4-202ENST00000639755 178 ntBASIC18.06■□□□□ 0.48
TPM3P06753 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
TPM3P06753 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TPM3P06753 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM3P06753 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM3P06753 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM3P06753 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
TPM3P06753 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.06■□□□□ 0.48
TPM3P06753 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM3P06753 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TPM3P06753 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM3P06753 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM3P06753 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.05■□□□□ 0.48
TPM3P06753 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM3P06753 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.05■□□□□ 0.48
TPM3P06753 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TPM3P06753 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TPM3P06753 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.05■□□□□ 0.48
TPM3P06753 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TPM3P06753 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM3P06753 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TPM3P06753 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.05■□□□□ 0.48
TPM3P06753 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM3P06753 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.05■□□□□ 0.48
TPM3P06753 AC006557.2-201ENST00000592985 1240 ntBASIC18.05■□□□□ 0.48
TPM3P06753 MTDHP4-201ENST00000600287 670 ntBASIC18.05■□□□□ 0.48
TPM3P06753 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TPM3P06753 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TPM3P06753 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TPM3P06753 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM3P06753 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.05■□□□□ 0.48
TPM3P06753 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TPM3P06753 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.05■□□□□ 0.48
TPM3P06753 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
TPM3P06753 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TPM3P06753 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TPM3P06753 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.04■□□□□ 0.48
TPM3P06753 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.04■□□□□ 0.48
TPM3P06753 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.04■□□□□ 0.48
TPM3P06753 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.04■□□□□ 0.48
TPM3P06753 SCARNA2-201ENST00000458748 420 ntBASIC18.04■□□□□ 0.48
TPM3P06753 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.04■□□□□ 0.48
TPM3P06753 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.04■□□□□ 0.48
TPM3P06753 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms