Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
POLR3DP05423 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR3DP05423 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.16■□□□□ 0.66
POLR3DP05423 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
POLR3DP05423 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 ZNF890P-202ENST00000530367 1156 ntBASIC19.16■□□□□ 0.66
POLR3DP05423 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR3DP05423 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.16■□□□□ 0.66
POLR3DP05423 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR3DP05423 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.16■□□□□ 0.66
POLR3DP05423 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR3DP05423 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR3DP05423 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR3DP05423 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR3DP05423 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.16■□□□□ 0.66
POLR3DP05423 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 BTBD7P1-201ENST00000447253 1453 ntBASIC19.16■□□□□ 0.66
POLR3DP05423 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
POLR3DP05423 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
POLR3DP05423 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR3DP05423 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
POLR3DP05423 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 CRB3P1-201ENST00000449338 276 ntBASIC19.15■□□□□ 0.66
POLR3DP05423 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.15■□□□□ 0.66
POLR3DP05423 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.15■□□□□ 0.66
POLR3DP05423 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.15■□□□□ 0.66
POLR3DP05423 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.15■□□□□ 0.66
POLR3DP05423 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.15■□□□□ 0.66
POLR3DP05423 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
POLR3DP05423 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.15■□□□□ 0.66
POLR3DP05423 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
POLR3DP05423 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.15■□□□□ 0.66
POLR3DP05423 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.14■□□□□ 0.66
POLR3DP05423 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
POLR3DP05423 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
POLR3DP05423 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.14■□□□□ 0.66
POLR3DP05423 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
POLR3DP05423 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
POLR3DP05423 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
POLR3DP05423 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
POLR3DP05423 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
POLR3DP05423 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 AC132872.4-202ENST00000622924 2756 ntBASIC19.14■□□□□ 0.65
POLR3DP05423 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
POLR3DP05423 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.14■□□□□ 0.65
POLR3DP05423 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR3DP05423 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR3DP05423 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.14■□□□□ 0.65
POLR3DP05423 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.14■□□□□ 0.65
POLR3DP05423 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.14■□□□□ 0.65
POLR3DP05423 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.14■□□□□ 0.65
POLR3DP05423 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.14■□□□□ 0.65
POLR3DP05423 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
POLR3DP05423 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.14■□□□□ 0.65
POLR3DP05423 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms