Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.28□□□□□ -0.12
APOC1P02654 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC1P02654 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
APOC1P02654 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
APOC1P02654 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
APOC1P02654 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
APOC1P02654 AC245100.5-201ENST00000452108 331 ntBASIC14.28□□□□□ -0.12
APOC1P02654 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.28□□□□□ -0.12
APOC1P02654 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.28□□□□□ -0.12
APOC1P02654 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.28□□□□□ -0.12
APOC1P02654 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.28□□□□□ -0.12
APOC1P02654 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.28□□□□□ -0.12
APOC1P02654 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.28□□□□□ -0.12
APOC1P02654 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APOC1P02654 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOC1P02654 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.27□□□□□ -0.12
APOC1P02654 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.27□□□□□ -0.12
APOC1P02654 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.27□□□□□ -0.12
APOC1P02654 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
APOC1P02654 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.27□□□□□ -0.12
APOC1P02654 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.27□□□□□ -0.12
APOC1P02654 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOC1P02654 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.27□□□□□ -0.12
APOC1P02654 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.27□□□□□ -0.12
APOC1P02654 BCAR1-209ENST00000546196 1340 ntBASIC14.27□□□□□ -0.12
APOC1P02654 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
APOC1P02654 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.27□□□□□ -0.13
APOC1P02654 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.27□□□□□ -0.13
APOC1P02654 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.27□□□□□ -0.13
APOC1P02654 AC093724.1-201ENST00000448659 1027 ntBASIC14.27□□□□□ -0.13
APOC1P02654 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.27□□□□□ -0.13
APOC1P02654 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.27□□□□□ -0.13
APOC1P02654 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.27□□□□□ -0.13
APOC1P02654 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
APOC1P02654 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.27□□□□□ -0.13
APOC1P02654 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
APOC1P02654 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
APOC1P02654 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.27□□□□□ -0.13
APOC1P02654 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.27□□□□□ -0.13
APOC1P02654 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.27□□□□□ -0.13
APOC1P02654 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.27□□□□□ -0.13
APOC1P02654 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
APOC1P02654 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOC1P02654 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
APOC1P02654 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
APOC1P02654 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.26□□□□□ -0.13
APOC1P02654 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
APOC1P02654 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.26□□□□□ -0.13
APOC1P02654 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
APOC1P02654 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOC1P02654 ZNF259P1-201ENST00000407656 1365 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms