Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 AL355306.1-201ENST00000415580 579 ntBASIC17.4■□□□□ 0.38
RNF40O75150 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF40O75150 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF40O75150 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF40O75150 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF40O75150 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF40O75150 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF40O75150 AC093520.2-201ENST00000561830 333 ntBASIC17.4■□□□□ 0.38
RNF40O75150 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.4■□□□□ 0.38
RNF40O75150 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
RNF40O75150 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF40O75150 AC005498.2-205ENST00000593218 784 ntBASIC17.4■□□□□ 0.38
RNF40O75150 AC026120.1-201ENST00000611536 926 ntBASIC17.4■□□□□ 0.38
RNF40O75150 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF40O75150 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF40O75150 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF40O75150 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RNF40O75150 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF40O75150 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF40O75150 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF40O75150 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF40O75150 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF40O75150 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF40O75150 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF40O75150 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.39■□□□□ 0.38
RNF40O75150 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF40O75150 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF40O75150 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF40O75150 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF40O75150 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF40O75150 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF40O75150 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF40O75150 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.39■□□□□ 0.37
RNF40O75150 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF40O75150 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 AL627223.1-201ENST00000416693 442 ntBASIC17.39■□□□□ 0.37
RNF40O75150 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.39■□□□□ 0.37
RNF40O75150 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF40O75150 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF40O75150 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RNF40O75150 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
RNF40O75150 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RNF40O75150 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF40O75150 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF40O75150 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF40O75150 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 CICP13-201ENST00000422015 2789 ntBASIC17.38■□□□□ 0.37
RNF40O75150 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF40O75150 SNX18-202ENST00000343017 3140 ntBASIC17.38■□□□□ 0.37
RNF40O75150 NORAD-201ENST00000565493 5339 ntBASIC17.38■□□□□ 0.37
RNF40O75150 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF40O75150 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF40O75150 AL671277.1-201ENST00000429656 993 ntBASIC17.38■□□□□ 0.37
RNF40O75150 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF40O75150 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF40O75150 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF40O75150 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RNF40O75150 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF40O75150 AC099522.2-201ENST00000607001 744 ntBASIC17.38■□□□□ 0.37
RNF40O75150 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF40O75150 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 AC009093.7-201ENST00000623853 1223 ntBASIC17.38■□□□□ 0.37
RNF40O75150 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF40O75150 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF40O75150 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RNF40O75150 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF40O75150 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF40O75150 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF40O75150 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF40O75150 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF40O75150 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms